Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015813193.1_cds_XP_016497458.1_11580
CDS Infomation

[gene=LOC107816271] [db_xref=GeneID:107816271] [protein=mitochondrial Rho GTPase 1-like] [protein_id=XP_016497458.1] [location=join(35859..36073,36604..36736,36910..37059,37181..37357,37696..37947,38624..38692,39572..39627,40070..40151,40819..41030,41163..41229,43437..43549,44438..44588,44800..44986,45757..45830)] [gbkey=CDS]
Sequence

ATGGCAGGAGGTGGTTCAGCTGCTGGAAAGGGTAATGCACCTGGTGTTCGGATAGTGGTT
GCTGGTGATGCCAAGACTGGAAAGTCTAGTTTGATCTTGACGGCTGCCACTGATTCTTAT
CCGTCCAATGTTCCTCCAGTGTTGCCTCCGACTAGGCTACCTGACGATATCTACCCTGAT
CGAGTACCTGTAACTATTATTGATACGTCCTCAAGTCCTGAAAATAGAGGTAAACTTGTG
GAAGAGCTGAAGAGAGCTGATGCAGTTGTACTGACTTACGCTTGTGATAAGCCTGCGACT
CTTGATCGTCTGAGTACTTTCTGGCTTCCTGAACTCCGCAGATTGGAGGTTCGGGTTCCT
GTCATTGTCGTGGGTTGCATGCTTGATAAAAGGGACGAACAGATTCCAGTCAGTTTGGAG
CAGGTGATGTCACCAATTATGCAACAATTTCGGGAGATTGAAACCTGTATTGAATGTTCA
GCATACAGACATATCCAGATTCCCGAGGTTTTCTACTATGCCCAAAAAGCTGTGCTTCAT
CCAACAGCTCCACTATTTGATCAGGAGGCCCAAACTTTAAAGCCACGATGCGTTAGGGCT
TTGAAGCGGATATTTATTCTTTGTGATCTTGATAGAGATGGTGCCCTAAGTGATGCAGAG
TTAAATGATTTTCAGGTCAAATGCTTCAATGCTCCATTGCAGCCTTCTGAGATAGTCGGT
GTTAAGAGAGTTGTGCAAGATAAATTACCTGATGGTGTCAATGAACGGGGTCTTACATTG
ACAGGTTTCCTGTTTCTTCATGCACTGTTTATTGAAAAAGGGCGTCTGGAGACAACATGG
ACTGTCCTGCGGAAATTTGGCTACAACAACGAGATCAGGCTTAGTGAGGATCAGCTTCCT
ACTCCCATCAAGAGACAACCTGACCAGAGTGTTGAGCTGACCAATGAAGCATTGGACTTC
CTCAGAAGAATCTTCCATACGTTCGACATTGATAGTGATGAGGCACTTCGATCGAACGAG
CTAGATGACTTGTTTTCCACTGCACCTGAGAACCCCTGGTCTGAAGCTCCATACAAGGAT
GCTGCAGAGAAGGATGCCTTGGGAGGACTCTCTCTTGATGGGTTTCTTTCGGAGTGGGCA
CTGATGACACTTCTTGATCCCATTTATAGTGTGGAGAATCTTATATACATTGGATATGCT
GGTGAGCCTTCATCTGCTATTCGTATAACTCGAAGAAGACGGTTAGATCGCAAGAAGCAG
CAATCAGATAGAAATGTCTATCAGTGTTTTGTTTTTGGGCCAAAAGAGGCTGGAAAATCA
GCCATTCTTAATTCGTTTATTGGAAGGCCATTCCCAGAAGAGTACGAATCAACTACTGCT
GATCAATATGGAGTAAATATTGTTGATCTCGGGGGGACTAAAAAAACTCTTGTGCTACGG
GAGATACCAGAAGATGGAGTGAAAAAGCTTTTATCTAGCAAGGATGCTTTAGCAGATTGT
GATATAGCGTTATTTGTCCATGATAGTTCACGCGAAGCTTCCTGGAAGAGAGCAGCAGAT
TTACTGGTGGATGTTGCTAGCCATGGAGAGGCCACTGGGCATGAGGTGCCCTGTCTCATT
GTAGCTGCTAAGGATGATCTGGATCCTTATTTGACCGAAATTCAAGATTCAACAAGGGTT
AGCCAGGATTTAGGGATTGAAGCTCCCATACCAATCAGCACGAAGCTTGGAGACTTCAGT
AATTTGTTCCGAAGGATTGTTAATGCAGCAGAGCATCCACATTTGAGCATTCCTGAAACA
GAAGCAGGAAGAAGCCGTAAGCAATATCATCGGCTCATCAATCGATCTCTCATGTTTGTA
TCAGTTGGAGCTGCTGTAGCTGTAGTAGGACTGGCAGCTTACCGTGTTTATGCTGCACGG
AAGAATGCATCGAGCTGA

Peptide Sequence

PEP ID

XP_016497458.1
PEP Infomation

PREDICTED: mitochondrial Rho GTPase 1-like [Nicotiana tabacum]
Sequence

MAGGGSAAGKGNAPGVRIVVAGDAKTGKSSLILTAATDSYPSNVPPVLPPTRLPDDIYPD
RVPVTIIDTSSSPENRGKLVEELKRADAVVLTYACDKPATLDRLSTFWLPELRRLEVRVP
VIVVGCMLDKRDEQIPVSLEQVMSPIMQQFREIETCIECSAYRHIQIPEVFYYAQKAVLH
PTAPLFDQEAQTLKPRCVRALKRIFILCDLDRDGALSDAELNDFQVKCFNAPLQPSEIVG
VKRVVQDKLPDGVNERGLTLTGFLFLHALFIEKGRLETTWTVLRKFGYNNEIRLSEDQLP
TPIKRQPDQSVELTNEALDFLRRIFHTFDIDSDEALRSNELDDLFSTAPENPWSEAPYKD
AAEKDALGGLSLDGFLSEWALMTLLDPIYSVENLIYIGYAGEPSSAIRITRRRRLDRKKQ
QSDRNVYQCFVFGPKEAGKSAILNSFIGRPFPEEYESTTADQYGVNIVDLGGTKKTLVLR
EIPEDGVKKLLSSKDALADCDIALFVHDSSREASWKRAADLLVDVASHGEATGHEVPCLI
VAAKDDLDPYLTEIQDSTRVSQDLGIEAPIPISTKLGDFSNLFRRIVNAAEHPHLSIPET
EAGRSRKQYHRLINRSLMFVSVGAAVAVVGLAAYRVYAARKNASS

Transcript Sequence

Gene sequence data has not been registered.